STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WA1_45825HNH endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (135 aa)    
Predicted Functional Partners:
WA1_45820
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.782
WA1_49030
Fatty-acid synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.608
WA1_26130
DNA element excision controlling factor XisI; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.575
WA1_34965
Fatty-acid synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.572
WA1_21045
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.571
WA1_27575
Fatty-acid oxidation protein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.554
WA1_37950
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.549
WA1_42040
Fatty-acid oxidation protein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.539
WA1_47845
Fatty-acid oxidation protein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.538
WA1_21050
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.533
Your Current Organism:
Scytonema hofmannii
NCBI taxonomy Id: 128403
Other names: S. hofmannii PCC 7110, Scytonema hofmannii PCC 7110, Scytonema sp. ATCC 29171, Scytonema sp. PCC 7110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.