STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORU94631.1Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (97 aa)    
Predicted Functional Partners:
ORU94630.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.909
ORU94887.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.734
ORU92893.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.656
ORU94888.1
Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.522
ORU95064.1
Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.487
A6F70_10180
Copper-transporting ATPase; Metagenomic; derived from metagenome: symbiont metagenome.
 
    0.408
Your Current Organism:
Cycloclasticus sp. symbiont of Bathymodiolus
NCBI taxonomy Id: 1284675
Other names: C. sp. symbiont of Bathymodiolus heckerae, Cycloclasticus sp. symbiont of Bathymodiolus heckerae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.