STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001592105_01724Unannotated protein. (583 aa)    
Predicted Functional Partners:
GCA_001592105_00302
Unannotated protein.
 
 0.999
GCA_001592105_00318
Unannotated protein.
  
 
 0.999
GCA_001592105_01725
Unannotated protein.
 
 
 0.999
GCA_001592105_01235
Unannotated protein.
 
 
 0.997
GCA_001592105_02938
Unannotated protein.
  
 0.987
GCA_001592105_00304
Unannotated protein.
 
  
 0.986
GCA_001592105_02926
Unannotated protein.
  
   0.985
GCA_001592105_02925
Unannotated protein.
  
 
 0.984
GCA_001592105_02937
Unannotated protein.
  
 0.983
GCA_001592105_02939
Unannotated protein.
  
 
 0.983
Your Current Organism:
Desulfofarcimen intricatum
NCBI taxonomy Id: 1285191
Other names: D. intricatum, DSM 26801, Desulfofarcimen intricatum (Watanabe et al. 2013) Watanabe et al. 2018, Desulfotomaculum intricatum, Desulfotomaculum intricatum Watanabe et al. 2013, Desulfotomaculum sp. SR45, NBRC 109411, strain SR45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.