Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AHI20051.1 | AHI21289.1 | CCASEI_07400 | CCASEI_13695 | Hypothetical protein; COG0822 NifU homolog involved in Fe-S cluster formation. | Hypothetical protein; COG2151 Predicted metal-sulfur cluster biosynthetic enzyme. | 0.506 |
| AHI20051.1 | AHI21290.1 | CCASEI_07400 | CCASEI_13700 | Hypothetical protein; COG0822 NifU homolog involved in Fe-S cluster formation. | Phenylacetic acid degradation NADH oxidoreductase; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. | 0.740 |
| AHI20973.1 | AHI21290.1 | CCASEI_12115 | CCASEI_13700 | COG2124 Cytochrome P450. | Phenylacetic acid degradation NADH oxidoreductase; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. | 0.835 |
| AHI21283.1 | AHI21285.1 | CCASEI_13665 | CCASEI_13675 | Hypothetical protein; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Phenylacetic acid degradation protein; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism. | 0.978 |
| AHI21283.1 | AHI21288.1 | CCASEI_13665 | CCASEI_13690 | Hypothetical protein; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | phenylacetate-CoA oxygenase subunit PaaI. | 0.950 |
| AHI21283.1 | AHI21289.1 | CCASEI_13665 | CCASEI_13695 | Hypothetical protein; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Hypothetical protein; COG2151 Predicted metal-sulfur cluster biosynthetic enzyme. | 0.948 |
| AHI21283.1 | AHI21290.1 | CCASEI_13665 | CCASEI_13700 | Hypothetical protein; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Phenylacetic acid degradation NADH oxidoreductase; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. | 0.940 |
| AHI21283.1 | AHI21296.1 | CCASEI_13665 | CCASEI_13730 | Hypothetical protein; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; COG1012 NAD-dependent aldehyde dehydrogenases. | 0.564 |
| AHI21283.1 | paaA | CCASEI_13665 | CCASEI_13680 | Hypothetical protein; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | phenylacetate-CoA oxygenase subunit PaaA. | 0.950 |
| AHI21283.1 | paaB | CCASEI_13665 | CCASEI_13685 | Hypothetical protein; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | phenylacetate-CoA oxygenase subunit PaaB; COG3460 Uncharacterized enzyme of phenylacetate metabolism. | 0.955 |
| AHI21285.1 | AHI21283.1 | CCASEI_13675 | CCASEI_13665 | Phenylacetic acid degradation protein; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism. | Hypothetical protein; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 0.978 |
| AHI21285.1 | AHI21288.1 | CCASEI_13675 | CCASEI_13690 | Phenylacetic acid degradation protein; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism. | phenylacetate-CoA oxygenase subunit PaaI. | 0.990 |
| AHI21285.1 | AHI21289.1 | CCASEI_13675 | CCASEI_13695 | Phenylacetic acid degradation protein; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism. | Hypothetical protein; COG2151 Predicted metal-sulfur cluster biosynthetic enzyme. | 0.990 |
| AHI21285.1 | AHI21290.1 | CCASEI_13675 | CCASEI_13700 | Phenylacetic acid degradation protein; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism. | Phenylacetic acid degradation NADH oxidoreductase; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. | 0.984 |
| AHI21285.1 | AHI21291.1 | CCASEI_13675 | CCASEI_13705 | Phenylacetic acid degradation protein; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism. | COG1024 Enoyl-CoA hydratase/carnithine racemase. | 0.618 |
| AHI21285.1 | AHI21296.1 | CCASEI_13675 | CCASEI_13730 | Phenylacetic acid degradation protein; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism. | Bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; COG1012 NAD-dependent aldehyde dehydrogenases. | 0.781 |
| AHI21285.1 | paaA | CCASEI_13675 | CCASEI_13680 | Phenylacetic acid degradation protein; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism. | phenylacetate-CoA oxygenase subunit PaaA. | 0.991 |
| AHI21285.1 | paaB | CCASEI_13675 | CCASEI_13685 | Phenylacetic acid degradation protein; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism. | phenylacetate-CoA oxygenase subunit PaaB; COG3460 Uncharacterized enzyme of phenylacetate metabolism. | 0.991 |
| AHI21288.1 | AHI21283.1 | CCASEI_13690 | CCASEI_13665 | phenylacetate-CoA oxygenase subunit PaaI. | Hypothetical protein; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 0.950 |
| AHI21288.1 | AHI21285.1 | CCASEI_13690 | CCASEI_13675 | phenylacetate-CoA oxygenase subunit PaaI. | Phenylacetic acid degradation protein; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism. | 0.990 |
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