STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC02710.1alpha-L-fucosidase 2. (845 aa)    
Predicted Functional Partners:
SDC02745.1
alpha-D-xyloside xylohydrolase; Belongs to the glycosyl hydrolase 31 family.
 
  
  0.718
SDC66390.1
alpha-L-fucosidase 2.
  
  
 
0.544
SDC21054.1
Alpha galactosidase A.
 
     0.543
SDC02652.1
Hypothetical protein.
    
  0.533
SDE10475.1
Hypothetical protein.
 
  
 
0.507
SDD12002.1
Hypothetical protein.
  
     0.482
SDC99949.1
Hypothetical protein.
  
  
  0.478
SDC02813.1
Alpha-L-fucosidase.
    
  0.475
SDC02620.1
Starch-binding associating with outer membrane.
 
  
  0.462
SDC02684.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
       0.458
Your Current Organism:
Niabella drilacis
NCBI taxonomy Id: 1285928
Other names: CCM 8410, DSM 25811, LMG 26954, LMG:26954, N. drilacis, Niabella drilacis Glaeser et al. 2013, Niabella sp. E90, strain E90
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