STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC68391.1Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family. (272 aa)    
Predicted Functional Partners:
SDC68423.1
Hypothetical protein.
 
     0.867
SDC68489.1
Starch-binding associating with outer membrane.
 
     0.545
SDC15170.1
Uncharacterized protein, contains GBA2_N and DUF608 domains.
  
     0.517
SDC68453.1
TonB-linked outer membrane protein, SusC/RagA family.
       0.511
SDC68518.1
Glycosyl hydrolases family 2, sugar binding domain.
       0.461
SDC12576.1
Gluconolactonase.
  
    0.457
Your Current Organism:
Niabella drilacis
NCBI taxonomy Id: 1285928
Other names: CCM 8410, DSM 25811, LMG 26954, LMG:26954, N. drilacis, Niabella drilacis Glaeser et al. 2013, Niabella sp. E90, strain E90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.