STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC69164.1Protein TonB. (272 aa)    
Predicted Functional Partners:
SDC69125.1
Biopolymer transport protein ExbD/TolR.
 
 
 0.956
SDD53609.1
Biopolymer transport protein ExbB.
 
 
 0.916
SDD53580.1
Biopolymer transport protein ExbD/TolR.
 
 
 0.914
SDD53554.1
Biopolymer transport protein ExbD/TolR.
 
 
 0.912
SDC83426.1
Iron complex outermembrane recepter protein.
  
 
 0.774
SDD54240.1
Hypothetical protein.
 
     0.756
SDD84250.1
TonB-linked outer membrane protein, SusC/RagA family.
  
 
 0.746
SDD01036.1
TonB-linked outer membrane protein, SusC/RagA family.
  
 
 0.715
SDD54275.1
Phosphate transport system substrate-binding protein.
 
     0.696
SDD17839.1
CarboxypepD_reg-like domain-containing protein.
  
   0.675
Your Current Organism:
Niabella drilacis
NCBI taxonomy Id: 1285928
Other names: CCM 8410, DSM 25811, LMG 26954, LMG:26954, N. drilacis, Niabella drilacis Glaeser et al. 2013, Niabella sp. E90, strain E90
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.