STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC98964.1Transcriptional regulator, GntR family. (246 aa)    
Predicted Functional Partners:
SDC98994.1
Mannose-6-phosphate isomerase, class I.
 
 
 0.896
SDD72384.1
Mannose-6-phosphate isomerase, class I.
 
    0.781
SDC64184.1
Nicotinamide-nucleotide adenylyltransferase, NadR type.
   
    0.646
SDC99040.1
Alpha-1,2-mannosidase, putative.
 
     0.587
SDC15726.1
Alpha-1,2-mannosidase, putative.
  
     0.478
SDC60145.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.443
SDD12907.1
DNA-binding transcriptional regulator, FadR family.
  
    0.426
Your Current Organism:
Niabella drilacis
NCBI taxonomy Id: 1285928
Other names: CCM 8410, DSM 25811, LMG 26954, LMG:26954, N. drilacis, Niabella drilacis Glaeser et al. 2013, Niabella sp. E90, strain E90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.