STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD00829.1alpha-L-fucosidase 2. (811 aa)    
Predicted Functional Partners:
SDC99702.1
Glycosyl hydrolase family 65, N-terminal domain.
  
  
 
0.655
SDC66390.1
alpha-L-fucosidase 2.
  
  
 
0.651
SDD00858.1
Type I phosphodiesterase / nucleotide pyrophosphatase.
       0.618
SDC21054.1
Alpha galactosidase A.
  
     0.612
SDE05130.1
alpha-L-fucosidase 2.
  
  
 
0.596
SDE10498.1
alpha-L-fucosidase.
  
  0.560
SDC64485.1
Hypothetical protein.
  
  
  0.517
SDE16082.1
alpha-L-fucosidase.
   
  0.511
SDD82549.1
Putative collagen-binding domain of a collagenase.
   
  0.498
SDD12002.1
Hypothetical protein.
 
     0.495
Your Current Organism:
Niabella drilacis
NCBI taxonomy Id: 1285928
Other names: CCM 8410, DSM 25811, LMG 26954, LMG:26954, N. drilacis, Niabella drilacis Glaeser et al. 2013, Niabella sp. E90, strain E90
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.