STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD37439.1Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. (325 aa)    
Predicted Functional Partners:
SDC98994.1
Mannose-6-phosphate isomerase, class I.
  
 
 0.557
SDD03921.1
Alpha-L-rhamnosidase N-terminal domain-containing protein.
  
  
  0.486
SDC95428.1
Sucrose-phosphate synthase.
  
 
 0.475
SDD56606.1
Sugar phosphate isomerase/epimerase.
  
     0.470
SDC37531.1
Lysophospholipase L1.
  
  
  0.459
SDD11853.1
alpha-L-rhamnosidase.
  
     0.459
SDC68011.1
Lysophospholipase L1.
  
     0.442
SDE16790.1
Heparinase II/III-like protein.
  
  
  0.441
SDD82549.1
Putative collagen-binding domain of a collagenase.
  
  
  0.436
SDD37404.1
H+/Cl-antiporter ClcA.
       0.433
Your Current Organism:
Niabella drilacis
NCBI taxonomy Id: 1285928
Other names: CCM 8410, DSM 25811, LMG 26954, LMG:26954, N. drilacis, Niabella drilacis Glaeser et al. 2013, Niabella sp. E90, strain E90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.