STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD37934.1Uncharacterized protein YPO0396. (1127 aa)    
Predicted Functional Partners:
SDD37856.1
Protein of unknown function.
 
   0.997
SDD37892.1
Protein of unknown function.
 
     0.951
SDD17499.1
Peptidase family M23.
  
   0.896
SDD37963.1
Hypothetical protein.
       0.469
SDC68045.1
DinB superfamily protein.
  
     0.465
SDC06510.1
N-acetylglutamate synthase, GNAT family.
  
     0.458
SDD58043.1
DNA helicase-2 / ATP-dependent DNA helicase PcrA; Belongs to the helicase family. UvrD subfamily.
  
     0.453
SDD24728.1
Activator of Hsp90 ATPase homolog 1-like protein.
  
     0.448
SDD93020.1
tRNA_anti-like.
  
     0.411
Your Current Organism:
Niabella drilacis
NCBI taxonomy Id: 1285928
Other names: CCM 8410, DSM 25811, LMG 26954, LMG:26954, N. drilacis, Niabella drilacis Glaeser et al. 2013, Niabella sp. E90, strain E90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.