STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD55598.1CarboxypepD_reg-like domain-containing protein. (830 aa)    
Predicted Functional Partners:
SDC67750.1
Butirosin biosynthesis protein H, N-terminal.
   
   0.805
SDD93952.1
Transglutaminase-like superfamily protein.
  
     0.531
SDC45192.1
Carboxypeptidase regulatory-like domain-containing protein.
  
     0.484
SDC84354.1
Two component transcriptional regulator, AraC family.
    
   0.470
SDD01646.1
AraC-type DNA-binding protein.
    
   0.470
zwf-2
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
       0.452
SDD57403.1
Outer membrane receptor proteins, mostly Fe transport.
  
     0.446
SDC08974.1
Family of unknown function.
  
     0.437
SDC09066.1
DinB superfamily protein.
 
     0.433
SDC34421.1
Pregnancy-associated plasma protein-A.
  
  
  0.423
Your Current Organism:
Niabella drilacis
NCBI taxonomy Id: 1285928
Other names: CCM 8410, DSM 25811, LMG 26954, LMG:26954, N. drilacis, Niabella drilacis Glaeser et al. 2013, Niabella sp. E90, strain E90
Server load: low (22%) [HD]