STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD57567.1Proton-dependent oligopeptide transporter, POT family. (573 aa)    
Predicted Functional Partners:
purD
Phosphoribosylamine--glycine ligase; Belongs to the GARS family.
       0.566
SDD57600.1
Proton-dependent oligopeptide transporter, POT family.
 
    
0.545
SDD49318.1
Peptidase family M1.
  
 
 0.486
SDD57630.1
Putative oligopeptide transporter, OPT family.
     
 0.444
SDC49009.1
Amino acid/polyamine/organocation transporter, APC superfamily (TC 2.A.3).
  
 
 0.424
SDE08645.1
Basic amino acid/polyamine antiporter, APA family.
  
 
 0.418
SDD88150.1
Amino acid transporter.
  
 
 0.400
Your Current Organism:
Niabella drilacis
NCBI taxonomy Id: 1285928
Other names: CCM 8410, DSM 25811, LMG 26954, LMG:26954, N. drilacis, Niabella drilacis Glaeser et al. 2013, Niabella sp. E90, strain E90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.