STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD76093.1Protein of unknown function. (249 aa)    
Predicted Functional Partners:
mnmG
tRNA uridine 5-carboxymethylaminomethyl modification enzyme; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.
       0.664
SDC90470.1
Outer membrane protein TolC.
  
     0.605
SDC40983.1
Hypothetical protein.
  
     0.578
SDD34382.1
Hypothetical protein.
  
     0.561
SDC58930.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
     0.549
SDE18374.1
Protein of unknown function (DU1801).
  
     0.548
SDD15168.1
Protein of unknown function.
  
     0.534
SDC58962.1
Tetratricopeptide repeat-containing protein.
  
     0.511
SDC14695.1
Putative beta-barrel porin-2, OmpL-like. bbp2.
  
     0.481
SDE27823.1
Protein N-acetyltransferase, RimJ/RimL family.
  
     0.464
Your Current Organism:
Niabella drilacis
NCBI taxonomy Id: 1285928
Other names: CCM 8410, DSM 25811, LMG 26954, LMG:26954, N. drilacis, Niabella drilacis Glaeser et al. 2013, Niabella sp. E90, strain E90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.