STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD98549.1Hypothetical protein. (445 aa)    
Predicted Functional Partners:
SDD98584.1
Hypothetical protein.
    
 0.812
SDD98622.1
Hypothetical protein.
       0.674
SDD98651.1
Hypothetical protein.
       0.585
SDD98685.1
Hypothetical protein.
       0.581
SDD98710.1
Zn-binding Pro-Ala-Ala-Arg (PAAR) domain-containing protein, incolved in TypeVI secretion.
       0.577
SDD98774.1
Uncharacterized conserved protein, implicated in type VI secretion and phage assembly.
     
 0.575
SDD98741.1
Protein of unknown function.
       0.574
SDD98517.1
Hypothetical protein.
       0.480
SDD98808.1
Hypothetical protein.
       0.458
SDD98478.1
Transglycosylase SLT domain-containing protein.
       0.423
Your Current Organism:
Niabella drilacis
NCBI taxonomy Id: 1285928
Other names: CCM 8410, DSM 25811, LMG 26954, LMG:26954, N. drilacis, Niabella drilacis Glaeser et al. 2013, Niabella sp. E90, strain E90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.