STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE01652.1ABC-2 type transport system ATP-binding protein. (253 aa)    
Predicted Functional Partners:
SDC39797.1
ABC-2 type transport system permease protein.
 
 0.954
SDC39826.1
ABC-2 type transport system permease protein.
 
 0.954
SDD25514.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
  
 
0.905
SDC36860.1
ABC-2 type transport system permease protein.
 
 
 0.847
SDD82059.1
Putative ABC transport system permease protein.
 
      0.791
SDC21943.1
ABC-type multidrug transport system, ATPase and permease component.
  
 0.778
SDC06197.1
Cu-processing system permease protein.
  
 0.750
SDE22246.1
ABC-2 type transport system permease protein.
 
 0.750
SDD53440.1
ABC-2 family transporter protein.
  
 0.698
SDC61095.1
Putative ABC transport system ATP-binding protein.
 
  
 0.659
Your Current Organism:
Niabella drilacis
NCBI taxonomy Id: 1285928
Other names: CCM 8410, DSM 25811, LMG 26954, LMG:26954, N. drilacis, Niabella drilacis Glaeser et al. 2013, Niabella sp. E90, strain E90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.