STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001418285_05341Unannotated protein. (398 aa)    
Predicted Functional Partners:
GCA_001418285_04613
Unannotated protein.
    
   0.826
atpA
Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.766
atpG
Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
   
   0.679
GCA_001418285_04353
Unannotated protein.
  
 0.627
rplQ
Unannotated protein.
   
   0.621
atpD
Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
   
   0.618
GCA_001418285_01592
Unannotated protein.
   
   0.617
rpsF
Unannotated protein; Binds together with S18 to 16S ribosomal RNA.
    
   0.615
rpmA
Unannotated protein; Belongs to the bacterial ribosomal protein bL27 family.
    
   0.615
GCA_001418285_01267
Unannotated protein; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
    
   0.615
Your Current Organism:
Streptomyces sp. WMMB322
NCBI taxonomy Id: 1286821
Other names: S. sp. WMMB 322, Streptomyces sp. WMMB 322
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.