STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ESY64123.1Transposase ISL3; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (388 aa)    
Predicted Functional Partners:
ESY59540.1
Glycosyltransferase family 2; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.548
ESY72641.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.494
ESY73036.1
Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.482
ESY64122.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.480
ESY67311.1
Dioxygenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.474
ESY71743.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.467
ESY64004.1
Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.463
ESY66618.1
Fe-S oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.459
ESY62587.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.445
ESY72232.1
Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.439
Your Current Organism:
Mesorhizobium sp. LNHC252B00
NCBI taxonomy Id: 1287252
Other names: M. sp. LNHC252B00
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.