STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ESY13328.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (161 aa)    
Predicted Functional Partners:
ESY13327.1
TdcF; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.509
ESY13682.1
trpE(G); catalyzes the formation of anthranilate from chorismate and glutamine; contains both component I and II; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.488
ESY13814.1
Elongation factor G; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.468
fusA
Elongation factor G; EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.468
ESY00010.1
Ribonuclease PH; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
   0.461
ESY09488.1
5-amino-6-(5-phosphoribosylamino)uracil reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.444
ESY03283.1
Acetolactate synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.429
Your Current Organism:
Mesorhizobium sp. LNJC398B00
NCBI taxonomy Id: 1287276
Other names: M. sp. LNJC398B00
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.