STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UCREL1_10959Putative kh domain-containing protein. (560 aa)    
Predicted Functional Partners:
UCREL1_5827
Putative rho-type gtpase-activating protein.
      
 0.623
UCREL1_7935
Putative exosome complex subunit rrp46 protein.
     
 0.575
UCREL1_10802
Putative 3 exoribonuclease family protein.
   
 
  0.564
UCREL1_6373
Putative exosome complex exonuclease rrp40 protein.
   
 
  0.558
UCREL1_1919
Putative exosome complex exonuclease rrp4 protein.
   
  0.508
UCREL1_11231
Putative cold response protein 2 protein.
   
 
 0.507
UCREL1_2207
Putative pumilio domain-containing protein.
   
 
 0.488
UCREL1_1238
Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.
   
  
 0.472
UCREL1_3895
Putative septum-promoting gtp-binding protein 1 protein.
    
 
 0.452
UCREL1_4462
Putative mrna-decapping enzyme 2 protein.
     
 0.444
Your Current Organism:
Eutypa lata
NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1
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