STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UCREL1_10691Putative hit zinc finger protein. (269 aa)    
Predicted Functional Partners:
UCREL1_58
Putative negative regulator of dna transposition protein.
    
   0.879
UCREL1_2241
Putative nucleolar protein nop58 protein.
   
 
 0.780
UCREL1_3640
Protein BCP1; Involved in nuclear export, actin cytoskeleton organization and vesicular transport; Belongs to the BCP1 family.
   
  
 0.655
UCREL1_4103
Putative rrna processing protein.
   
  
 0.533
UCREL1_6356
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 
 0.528
UCREL1_11584
RNA helicase.
   
  
 0.525
UCREL1_11754
Putative rrna processing protein.
   
 
 0.507
UCREL1_7052
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 
 0.503
UCREL1_2341
Putative g-patch domain-containing protein.
   
    0.470
UCREL1_11800
Putative rrna-processing protein utp23 protein.
   
    0.469
Your Current Organism:
Eutypa lata
NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1
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