STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UCREL1_9961Putative pre-mrna splicing factor protein. (183 aa)    
Predicted Functional Partners:
UCREL1_7656
Nuclear cap-binding protein subunit 2.
    
 0.840
UCREL1_1691
Putative splicing factor u2af 23 kDa subunit protein.
   
 0.745
UCREL1_7281
Putative pre-mrna polyadenylation factor fip1 protein.
   
 0.733
UCREL1_840
Small nuclear ribonucleoprotein Sm D3.
   
 0.717
UCREL1_6889
Putative exportin 1-like protein.
    
 
 0.715
UCREL1_871
Putative pre-mrna-splicing factor slu7 protein.
    
 0.712
UCREL1_6890
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.705
UCREL1_2880
Putative zinc finger ccch type domain containing protein.
    
 0.701
UCREL1_2026
Small nuclear ribonucleoprotein G.
   
 0.698
UCREL1_5453
Small nuclear ribonucleoprotein Sm D2.
   
 0.690
Your Current Organism:
Eutypa lata
NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.