STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UCREL1_11812Putative zinc finger protein yan protein. (541 aa)    
Predicted Functional Partners:
UCREL1_4123
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
   
 
 0.927
UCREL1_10270
Putative nucleolar gtp-binding protein.
   
 
 0.869
UCREL1_7489
Putative curved dna-binding protein.
   
 
 0.860
UCREL1_11618
Putative 60s ribosomal protein l7 protein.
   
 
 0.781
TIF6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family.
   
 
 0.776
UCREL1_2192
Putative regulator of chromosome condensation-like protein.
   
 
 0.771
UCREL1_9088
Putative 60s ribosomal protein l24 protein.
    
 
 0.750
UCREL1_9942
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
   
 
 0.747
UCREL1_4613
Putative ribosome biogenesis protein rlp24 protein.
   
 
 0.735
UCREL1_2531
Putative 60s ribosomal protein l3 protein; Belongs to the universal ribosomal protein uL3 family.
    
 
 0.723
Your Current Organism:
Eutypa lata
NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1
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