STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UCREL1_11649Putative midasin protein. (1810 aa)    
Predicted Functional Partners:
UCREL1_5273
Putative wd repeat-containing protein.
   
 
 0.990
UCREL1_9942
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
   
 
 0.953
UCREL1_630
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
   
 
 0.953
YTM1
Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.953
UCREL1_8
Putative nucleolar gtp-binding protein 2 protein.
   
 
 0.936
UCREL1_7489
Putative curved dna-binding protein.
   
 
 0.920
UCREL1_7710
Putative zinc finger protein.
   
 
 0.905
UCREL1_6089
Putative pre-rrna-processing protein ipi1 protein.
    
 
 0.904
UCREL1_775
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.903
UCREL1_2761
Putative wd repeat-containing protein.
   
 0.877
Your Current Organism:
Eutypa lata
NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1
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