STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UCREL1_9291Putative c2h2 finger domain-containing protein. (237 aa)    
Predicted Functional Partners:
UCREL1_5443
Putative microfibril-associated protein.
   
 0.998
UCREL1_11507
Putative sec63 brl domain-containing protein.
   
 
 0.995
UCREL1_4321
Putative sart-1 family protein.
    
 0.995
UCREL1_7649
Putative prp38 family protein.
   
 0.984
UCREL1_7743
Putative mrna splicing factor (Prp1 zer1) protein.
   
 0.980
UCREL1_4023
Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family.
    
 0.973
UCREL1_675
Putative lsm domain-containing protein.
   
 0.959
LSM3
U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
   
 0.953
UCREL1_11572
Putative u4 u6 small nuclear ribonucleoprotein prp3 protein.
   
 0.946
UCREL1_4999
Uncharacterized protein.
    
  0.946
Your Current Organism:
Eutypa lata
NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1
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