STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UCREL1_9271Putative trna nucleotidyltransferase protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (532 aa)    
Predicted Functional Partners:
UCREL1_9273
Putative trna nucleotidyltransferase protein.
 
      0.900
UCREL1_11577
3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family.
      0.665
UCREL1_3426
Putative biotin-protein ligase ligase protein.
  
  
 0.597
UCREL1_6882
Putative trna processing endoribonuclease protein.
  
  
 0.513
UCREL1_9561
Putative rna exonuclease rex2 protein.
     
 0.474
UCREL1_11107
Uncharacterized protein.
  
 0.471
UCREL1_11296
Putative lactonohydrolase protein.
  
 0.471
UCREL1_2988
Putative gluconolactonase protein.
  
 0.471
UCREL1_9477
Putative six-bladed beta-propeller-like protein.
  
 0.471
UCREL1_1344
Putative evolved d-pantonohydrolase protein.
  
 0.471
Your Current Organism:
Eutypa lata
NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1
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