UCREL1_11149 protein (Eutypa lata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

UCREL1_11149

Putative abhydrolase domain-containing protein. (305 aa)

Predicted Functional Partners:

UCREL1_4911

0.868

UCREL1_4912

0.802

UCREL1_8788

0.619

UCREL1_10261

0.619

UCREL1_7809

0.619

UCREL1_9064

0.594

UCREL1_291

0.572

UCREL1_2235

0.558

UCREL1_7195

0.494

UCREL1_3827

0.466

Your Current Organism:

Eutypa lata

NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
UCREL1_10261	UCREL1_11149	M7SZ03	M7SCK7	Putative phosphatidyl synthase protein.	Putative abhydrolase domain-containing protein.	0.619
UCREL1_10261	UCREL1_3827	M7SZ03	M7SY02	Putative phosphatidyl synthase protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.572
UCREL1_11149	UCREL1_10261	M7SCK7	M7SZ03	Putative abhydrolase domain-containing protein.	Putative phosphatidyl synthase protein.	0.619
UCREL1_11149	UCREL1_2235	M7SCK7	M7TLB1	Putative abhydrolase domain-containing protein.	Putative 37s ribosomal protein rsm22 protein.	0.558
UCREL1_11149	UCREL1_291	M7SCK7	M7T7Q9	Putative abhydrolase domain-containing protein.	Putative ribonuclease 3 protein.	0.572
UCREL1_11149	UCREL1_3827	M7SCK7	M7SY02	Putative abhydrolase domain-containing protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.466
UCREL1_11149	UCREL1_4911	M7SCK7	M7TDV1	Putative abhydrolase domain-containing protein.	Putative tryptophanyl-trna synthetase protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.868
UCREL1_11149	UCREL1_4912	M7SCK7	M7SV02	Putative abhydrolase domain-containing protein.	Putative 30s ribosomal protein s10 protein.	0.802
UCREL1_11149	UCREL1_7195	M7SCK7	M7SN12	Putative abhydrolase domain-containing protein.	Putative alpha beta fold family protein.	0.494
UCREL1_11149	UCREL1_7809	M7SCK7	M7TEU4	Putative abhydrolase domain-containing protein.	Putative phosphatidyl synthase protein.	0.619
UCREL1_11149	UCREL1_8788	M7SCK7	M7SJB0	Putative abhydrolase domain-containing protein.	Putative had-superfamily subfamily iia hydrolase protein.	0.619
UCREL1_11149	UCREL1_9064	M7SCK7	M7T2C1	Putative abhydrolase domain-containing protein.	Uncharacterized protein.	0.594
UCREL1_2235	UCREL1_11149	M7TLB1	M7SCK7	Putative 37s ribosomal protein rsm22 protein.	Putative abhydrolase domain-containing protein.	0.558
UCREL1_291	UCREL1_11149	M7T7Q9	M7SCK7	Putative ribonuclease 3 protein.	Putative abhydrolase domain-containing protein.	0.572
UCREL1_291	UCREL1_3827	M7T7Q9	M7SY02	Putative ribonuclease 3 protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.435
UCREL1_291	UCREL1_4912	M7T7Q9	M7SV02	Putative ribonuclease 3 protein.	Putative 30s ribosomal protein s10 protein.	0.483
UCREL1_3827	UCREL1_10261	M7SY02	M7SZ03	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Putative phosphatidyl synthase protein.	0.572
UCREL1_3827	UCREL1_11149	M7SY02	M7SCK7	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Putative abhydrolase domain-containing protein.	0.466
UCREL1_3827	UCREL1_291	M7SY02	M7T7Q9	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Putative ribonuclease 3 protein.	0.435
UCREL1_3827	UCREL1_4912	M7SY02	M7SV02	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Putative 30s ribosomal protein s10 protein.	0.591