STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UCREL1_10900Putative mrna decapping protein. (274 aa)    
Predicted Functional Partners:
UCREL1_9505
5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins.
    
 
 0.653
UCREL1_1783
Putative nadph-dependent fmn fad containing protein.
      
 0.583
UCREL1_1983
5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.
   
  
 0.504
UCREL1_4704
Putative dcp1-like decapping family protein.
      
 0.497
UCREL1_7845
Putative atp-dependent rna helicase dhh1 protein; Belongs to the DEAD box helicase family.
   
  
 0.490
UCREL1_4462
Putative mrna-decapping enzyme 2 protein.
   
  
 0.487
UCREL1_6402
Putative galactoside o-acetyltransferase protein.
      
 0.453
UCREL1_10903
Putative pre-mrna-splicing factor cef-1 protein.
 
      0.445
UCREL1_5499
Uncharacterized protein.
   
  
 0.433
UCREL1_297
Histidinol-phosphatase; Belongs to the PHP hydrolase family. HisK subfamily.
 
 
    0.410
Your Current Organism:
Eutypa lata
NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.