STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UCREL1_10725U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (650 aa)    
Predicted Functional Partners:
UCREL1_5203
Putative sas10 utp3 family protein.
   
 0.999
UCREL1_9663
U3 small nucleolar RNA-associated protein 22.
   
 0.995
UCREL1_4103
Putative rrna processing protein.
   
 0.993
UCREL1_7006
U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.
   
 
 0.992
UCREL1_10952
Putative nucleolar complex protein.
   
 0.991
UCREL1_1261
Putative helicase associated domain-containing protein.
   
 0.989
UCREL1_11671
Putative wd repeat containing protein 36 protein.
   
 0.987
UCREL1_11629
Putative atp-dependent rna helicase dbp8 protein; Belongs to the DEAD box helicase family.
   
 
 0.985
UCREL1_8869
Putative sas10 utp3 c1d family protein.
   
  0.985
UCREL1_2848
Putative pre-rrna-processing protein esf2 protein.
   
 
 0.985
Your Current Organism:
Eutypa lata
NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1
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