STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UCREL1_8260Putative pkd domain containing protein. (617 aa)    
Predicted Functional Partners:
UCREL1_7845
Putative atp-dependent rna helicase dhh1 protein; Belongs to the DEAD box helicase family.
  
 0.860
UCREL1_9247
Putative dna-directed rna polymerases i protein.
  
 
 0.806
UCREL1_6140
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
  
 0.761
UCREL1_8310
Putative u1 small nuclear ribonucleo protein.
  
 0.759
UCREL1_5210
Putative pre-mrna-splicing factor cwc21 protein.
    
 0.735
UCREL1_75
Putative mitochondrial 37s ribosomal protein mrps16 protein.
  
 
 0.729
UCREL1_8944
Putative eukaryotic translation initiation factor 1a protein; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.
  
  
 0.728
UCREL1_11231
Putative cold response protein 2 protein.
   
 0.717
UCREL1_840
Small nuclear ribonucleoprotein Sm D3.
   
 0.717
UCREL1_7799
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 
 0.714
Your Current Organism:
Eutypa lata
NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.