STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UCREL1_8127Putative branchpoint-bridging protein. (253 aa)    
Predicted Functional Partners:
UCREL1_670
Putative surp module family protein.
   
 0.919
UCREL1_11516
Putative pre-mrna-processing atp-dependent rna helicase prp5 protein.
   
 0.918
UCREL1_2682
Putative splicing factor 3a subunit protein.
   
 0.918
UCREL1_8602
Putative splicing factor 3a subunit 3 protein.
   
 0.909
UCREL1_10903
Putative pre-mrna-splicing factor cef-1 protein.
   
 
 0.898
UCREL1_9163
Putative u1 snrnp splicing complex subunit protein.
   
 0.752
UCREL1_9441
Putative pre-mrna-processing protein prp40 protein.
    
 
 0.750
UCREL1_7208
Putative rna-binding protein rbm25 protein.
   
 0.736
UCREL1_426
Putative u2 snrnp component prp10 protein.
   
 0.724
UCREL1_3065
Putative arsenite resistance protein ars2 protein.
   
  0.701
Your Current Organism:
Eutypa lata
NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.