STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UCREL1_7682Putative e3 ubiquitin-protein ligase ptr1 + rna transporter 1 protein. (3824 aa)    
Predicted Functional Partners:
UCREL1_2825
Putative polyubiquitin protein.
   
 0.913
UCREL1_1510
Putative e3 ubiquitin-protein ligase upl3 protein.
   
 
0.811
UCREL1_7911
Putative ubiquitin-40s ribosomal protein s31 fusion protein.
   
 0.661
UCREL1_10834
BZIP domain-containing protein.
   
 0.661
UCREL1_10860
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
   
 
 0.646
UCREL1_7562
Putative an1-type zinc finger protein.
    
 0.645
UCREL1_9872
Putative ubiquitin protein.
    
 0.645
UCREL1_9873
Putative rna polymerase i specific transcription initiation factor protein.
    
 0.645
UCREL1_9519
Putative elongation factor 3 protein.
   
   0.606
UCREL1_8813
Putative histone acetylase complex subunit protein; Belongs to the PI3/PI4-kinase family.
   
 
 0.597
Your Current Organism:
Eutypa lata
NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1
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