UCREL1_7575 protein (Eutypa lata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

UCREL1_7575

Uncharacterized protein. (213 aa)

Predicted Functional Partners:

UCREL1_9226

0.957

UCREL1_4059

0.850

UCREL1_4058

0.850

UCREL1_7000

0.806

UCREL1_7327

0.686

UCREL1_5008

0.604

UCREL1_7368

0.590

UCREL1_10756

0.583

UCREL1_10683

0.536

UCREL1_3306

0.534

Your Current Organism:

Eutypa lata

NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
UCREL1_10683	UCREL1_10756	M7S8E1	M7S869	Putative carbohydrate-binding module family 48 protein.	Putative ulk ulk protein kinase protein.	0.683
UCREL1_10683	UCREL1_3306	M7S8E1	M7TSP3	Putative carbohydrate-binding module family 48 protein.	Putative phosphatidylinositol 3-kinase protein; Belongs to the PI3/PI4-kinase family.	0.643
UCREL1_10683	UCREL1_4058	M7S8E1	M7SWL8	Putative carbohydrate-binding module family 48 protein.	Putative nuclear protein snf4 protein.	0.885
UCREL1_10683	UCREL1_4059	M7S8E1	M7SWK3	Putative carbohydrate-binding module family 48 protein.	Uncharacterized protein.	0.885
UCREL1_10683	UCREL1_5008	M7S8E1	M7TDK3	Putative carbohydrate-binding module family 48 protein.	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	0.515
UCREL1_10683	UCREL1_7000	M7S8E1	M7SNM7	Putative carbohydrate-binding module family 48 protein.	Non-specific serine/threonine protein kinase.	0.536
UCREL1_10683	UCREL1_7368	M7S8E1	M7SNA8	Putative carbohydrate-binding module family 48 protein.	Putative wd repeat-containing protein mip1 protein.	0.664
UCREL1_10683	UCREL1_7575	M7S8E1	M7SGP3	Putative carbohydrate-binding module family 48 protein.	Uncharacterized protein.	0.536
UCREL1_10756	UCREL1_10683	M7S869	M7S8E1	Putative ulk ulk protein kinase protein.	Putative carbohydrate-binding module family 48 protein.	0.683
UCREL1_10756	UCREL1_3306	M7S869	M7TSP3	Putative ulk ulk protein kinase protein.	Putative phosphatidylinositol 3-kinase protein; Belongs to the PI3/PI4-kinase family.	0.993
UCREL1_10756	UCREL1_4058	M7S869	M7SWL8	Putative ulk ulk protein kinase protein.	Putative nuclear protein snf4 protein.	0.741
UCREL1_10756	UCREL1_4059	M7S869	M7SWK3	Putative ulk ulk protein kinase protein.	Uncharacterized protein.	0.741
UCREL1_10756	UCREL1_5008	M7S869	M7TDK3	Putative ulk ulk protein kinase protein.	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	0.998
UCREL1_10756	UCREL1_7000	M7S869	M7SNM7	Putative ulk ulk protein kinase protein.	Non-specific serine/threonine protein kinase.	0.965
UCREL1_10756	UCREL1_7368	M7S869	M7SNA8	Putative ulk ulk protein kinase protein.	Putative wd repeat-containing protein mip1 protein.	0.986
UCREL1_10756	UCREL1_7575	M7S869	M7SGP3	Putative ulk ulk protein kinase protein.	Uncharacterized protein.	0.583
UCREL1_10756	UCREL1_9226	M7S869	M7SHR3	Putative ulk ulk protein kinase protein.	Putative carbohydrate-binding module family 48 protein.	0.742
UCREL1_3306	UCREL1_10683	M7TSP3	M7S8E1	Putative phosphatidylinositol 3-kinase protein; Belongs to the PI3/PI4-kinase family.	Putative carbohydrate-binding module family 48 protein.	0.643
UCREL1_3306	UCREL1_10756	M7TSP3	M7S869	Putative phosphatidylinositol 3-kinase protein; Belongs to the PI3/PI4-kinase family.	Putative ulk ulk protein kinase protein.	0.993
UCREL1_3306	UCREL1_4058	M7TSP3	M7SWL8	Putative phosphatidylinositol 3-kinase protein; Belongs to the PI3/PI4-kinase family.	Putative nuclear protein snf4 protein.	0.663