STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UCREL1_9750Putative histone deacetylase rpd3 protein. (671 aa)    
Predicted Functional Partners:
UCREL1_9504
Putative histone acetyltransferase type b subunit 2 protein.
   
 0.972
UCREL1_2186
Putative response regulator-like protein.
    
 0.955
UCREL1_9479
Putative fas1 domain-containing protein.
   
 0.929
UCREL1_5092
Putative histone deacetylase complex protein.
   
 0.929
UCREL1_11534
Putative flavin containing amine oxidoreductase protein.
   
 0.904
UCREL1_2278
Putative pre-mrna splicing factor protein.
    
 0.876
UCREL1_10605
Putative histone acetylase complex subunit protein.
    
 0.871
UCREL1_10604
Putative keratinolytic protein.
    
 0.871
UCREL1_10654
SAP30_Sin3_bdg domain-containing protein.
    
 0.871
UCREL1_11574
Histone H3; Belongs to the histone H3 family.
   
 0.870
Your Current Organism:
Eutypa lata
NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.