STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UCREL1_7217Putative dna-binding protein. (1027 aa)    
Predicted Functional Partners:
UCREL1_9012
Putative dna-dependent rna polymerase i subunit a43 protein.
    
 0.698
UCREL1_11460
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.688
UCREL1_4549
Putative a49-like rna polymerase i associated factor protein.
    
 0.684
UCREL1_11328
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.668
UCREL1_9849
Putative dna-directed rna polymerases i and iii 40 kDa polypeptide protein.
    
  0.666
UCREL1_11573
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.661
UCREL1_8824
Putative dna-directed rna polymerases ii 24 kDa polypeptide protein.
     
 0.630
UCREL1_9504
Putative histone acetyltransferase type b subunit 2 protein.
     
 0.628
UCREL1_11620
Putative dna repair and recombination protein rad26 protein.
    
 0.627
UCREL1_11678
Putative tata-box-binding protein.
   
 
 0.571
Your Current Organism:
Eutypa lata
NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1
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