STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UCREL1_6976Putative pentatricopeptide repeat protein. (471 aa)    
Predicted Functional Partners:
UCREL1_3249
Spindle pole body component.
    
 0.608
UCREL1_10589
Putative dash complex subunit ask1 protein.
    
 0.521
UCREL1_6264
Spindle pole body component.
    
 0.521
UCREL1_3219
Spindle pole body component.
    
 0.513
UCREL1_8495
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
   
 0.504
UCREL1_11742
Putative methylcrotonoyl-carboxylase beta chain protein.
   
 
 0.484
UCREL1_3324
Spindle pole body component.
    
 0.451
UCREL1_5628
Putative ribosomal protein s17 protein.
   
 
 0.405
UCREL1_10256
Nucleoside diphosphate kinase.
    
 0.401
Your Current Organism:
Eutypa lata
NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.