STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UCREL1_8562Putative vacuolar protein sorting-associated protein vps5 protein. (564 aa)    
Predicted Functional Partners:
UCREL1_9623
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.988
UCREL1_264
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
   
 
 0.985
UCREL1_9635
Putative vacuolar protein sorting-associated protein 17 protein.
    
 
0.947
UCREL1_6624
Putative vacuolar protein sorting-associated protein 26b-b protein.
   
 
 0.927
UCREL1_10007
Putative vacuolar protein sorting-associated protein 26b-b protein.
   
 
 0.927
UCREL1_416
Putative methionine adenosyltransferase 2 subunit beta protein.
 
  
   0.897
MED11
Mediator of RNA polymerase II transcription subunit 11; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
 
      0.887
UCREL1_6342
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.737
UCREL1_5571
AP-1 complex subunit gamma.
     
 0.714
UCREL1_2550
Putative vacuolar sorting receptor protein.
    
 0.709
Your Current Organism:
Eutypa lata
NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.