STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UCREL1_5475Putative dsdna-binding protein pdcd5 protein. (128 aa)    
Predicted Functional Partners:
UCREL1_2146
Putative 40s ribosomal protein s19 protein.
  
    0.862
UCREL1_6890
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
    0.846
UCREL1_5711
Putative 60s ribosomal protein l30 protein.
   
    0.846
UCREL1_11518
Putative 60s ribosomal protein l35 protein.
   
    0.843
UCREL1_606
Putative elongation factor 1-beta protein; Belongs to the EF-1-beta/EF-1-delta family.
   
    0.842
UCREL1_11170
Putative 60s ribosomal protein l26 protein.
   
    0.838
UCREL1_2522
Putative 60s ribosomal protein l34 protein.
   
    0.838
UCREL1_535
Putative 60s ribosomal protein l25 protein.
   
    0.822
UCREL1_3792
Putative prefoldin subunit protein.
   
    0.809
UCREL1_7680
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
    0.709
Your Current Organism:
Eutypa lata
NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1
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