STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UCREL1_6239Putative trna wybutosine-synthesizing protein. (342 aa)    
Predicted Functional Partners:
UCREL1_10218
tRNA wybutosine-synthesizing protein 2; S-adenosyl-L-methionine-dependent transferase that acts as a component of the wybutosine biosynthesis pathway. Wybutosine is a hyper modified guanosine with a tricyclic base found at the 3'-position adjacent to the anticodon of eukaryotic phenylalanine tRNA. Catalyzes the transfer of the alpha-amino-alpha-carboxypropyl (acp) group from S- adenosyl-L-methionine to the C-7 position of 4-demethylwyosine (imG-14) to produce wybutosine-86.
 
 
 0.778
UCREL1_2645
Putative wyosine base formation protein.
  
  
 0.755
UCREL1_3373
Putative trna (Uridine-2-o-)-methyltransferase trm7 protein.
   
  
 0.603
UCREL1_6973
Putative trna (Uracil-5-)-methyltransferase protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
   
  
 0.599
UCREL1_926
Putative leucine carboxyl methyltransferase protein.
      
 0.584
UCREL1_1800
Putative trna pseudouridine synthase d protein.
   
  
 0.528
UCREL1_6893
Putative-dimethylguanosine trna methyltransferase protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.
   
  
 0.495
UCREL1_4105
Putative initiator trna phosphoribosyl transferase protein.
      
 0.483
UCREL1_1193
Putative glutamine synthetase protein; Belongs to the glutamine synthetase family.
      
 0.465
UCREL1_11800
Putative rrna-processing protein utp23 protein.
   
    0.448
Your Current Organism:
Eutypa lata
NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1
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