STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UCREL1_4169Putative pkhd-type hydroxylase tpa1 protein. (741 aa)    
Predicted Functional Partners:
UCREL1_9519
Putative elongation factor 3 protein.
  
 
 0.995
UCREL1_900
Putative prion formation protein 1 protein.
   
 
 0.799
UCREL1_6140
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
   0.700
UCREL1_101
Putative coproporphyrinogen iii oxidase protein.
   
  
 0.597
UCREL1_6893
Putative-dimethylguanosine trna methyltransferase protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.
   
 
 0.571
UCREL1_5648
Putative eukaryotic peptide chain release factor gtp-binding subunit protein.
   
 
 0.542
UCREL1_10522
Putative eukaryotic peptide chain release factor subunit 1 protein.
   
 
 0.532
UCREL1_3962
Putative 40s ribosomal protein s23 protein; Belongs to the universal ribosomal protein uS12 family.
    
 
 0.520
UCREL1_715
Putative 2og-fe oxygenase family oxidoreductase protein.
  
 
 0.481
UCREL1_8469
Putative ribosome biogenesis protein tsr1 protein.
   
    0.473
Your Current Organism:
Eutypa lata
NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.