STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UCREL1_3604Putative r3h domain-containing protein. (545 aa)    
Predicted Functional Partners:
UCREL1_2073
Putative mrna 3-end-processing protein rna-14 protein.
   
 0.913
UCREL1_7281
Putative pre-mrna polyadenylation factor fip1 protein.
   
 0.906
UCREL1_10696
Putative metallo-beta-lactamase superfamily protein.
   
 0.903
UCREL1_2880
Putative zinc finger ccch type domain containing protein.
    
 0.897
UCREL1_6689
Uncharacterized protein.
    
 0.844
UCREL1_6500
Putative mrna cleavage factor complex component pcf11 protein.
    
 0.834
CLP1
mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.
   
 0.811
UCREL1_10674
Putative polyadenylate-binding protein 2 protein.
   
 0.774
UCREL1_7656
Nuclear cap-binding protein subunit 2.
    
 0.774
UCREL1_1627
Uncharacterized protein.
   
 0.774
Your Current Organism:
Eutypa lata
NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.