STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UCREL1_2250Putative bromodomain-containing factor 1 protein. (953 aa)    
Predicted Functional Partners:
UCREL1_948
Putative transcription initiation factor tfiid subunit 7 protein.
    
 
 0.908
UCREL1_2639
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 
 0.837
UCREL1_11574
Histone H3; Belongs to the histone H3 family.
   
 
 0.783
UCREL1_6280
Putative swr1-complex protein 4 protein.
    
 
 0.694
UCREL1_8459
Putative transcription initiation factor tfiid subunit 1 protein.
  
 
 
 0.634
UCREL1_4871
Putative helicase swr-1 protein.
   
 
 0.620
UCREL1_3368
Putative yeats family protein.
    
 
 0.609
UCREL1_10764
SWR1-complex protein 5; Component of the SWR1 complex which mediates the ATP- dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Involved in chromosome stability.
    
 
 0.561
UCREL1_3595
Histone H2A; Belongs to the histone H2A family.
    
 
 0.546
UCREL1_10065
Putative casein kinase ii subunit alpha protein; Belongs to the protein kinase superfamily.
    
 
 0.499
Your Current Organism:
Eutypa lata
NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.