STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UCREL1_1870Putative beta-lactamase-type transpeptidase fold domain containing protein. (575 aa)    
Predicted Functional Partners:
UCREL1_11017
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 
 0.860
UCREL1_2699
Putative mating-type switching protein swi10 protein.
   
 0.828
UCREL1_8941
Putative dna repair protein.
    
 0.825
UCREL1_11505
Putative npl4 family protein.
    
 0.819
UCREL1_10970
Putative atp-dependent dna helicase mph1 protein.
    
 0.764
UCREL1_9981
Uncharacterized protein.
  
 0.761
UCREL1_2039
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
   
 0.713
UCREL1_8056
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
 0.680
UCREL1_1712
Putative crossover junction endonuclease mus81 protein.
    
 0.654
UCREL1_155
Putative copii coat assembly protein sec16 protein.
     
 0.641
Your Current Organism:
Eutypa lata
NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1
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