STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UCREL1_8603Putative atp-dependent rna helicase fal-1 protein; Belongs to the DEAD box helicase family. (400 aa)    
Predicted Functional Partners:
UCREL1_1370
Putative rna-binding protein 8a protein.
   
 0.999
UCREL1_5597
Putative mago nashi domain protein.
   
 0.998
UCREL1_3085
Putative cell cycle control protein.
    
 0.998
UCREL1_10000
Putative suppressor of glycerol defect protein.
   
 
 0.984
UCREL1_4802
Putative nonsense-mediated mrna decay protein.
   
 0.983
UCREL1_11698
Putative rna recognition domain-containing protein.
   
 0.978
UCREL1_1180
Putative rna binding protein.
   
 0.978
UCREL1_6092
Putative atp-dependent rna helicase protein.
  
0.976
UCREL1_8869
Putative sas10 utp3 c1d family protein.
   
 0.975
UCREL1_1261
Putative helicase associated domain-containing protein.
   
 0.975
Your Current Organism:
Eutypa lata
NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1
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