STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UCREL1_1071Putative heat repeat protein. (1094 aa)    
Predicted Functional Partners:
UCREL1_3373
Putative trna (Uridine-2-o-)-methyltransferase trm7 protein.
   
 
 0.980
UCREL1_86
Putative wd repeat-containing protein.
   
 
 0.705
UCREL1_5595
Putative rna methylase family protein.
   
  
 0.632
UCREL1_827
Putative trna methyltransferase complex gcd14 subunit protein.
   
  
 0.616
TRM82
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family.
   
  
 0.609
TRM8
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
   
  
 0.603
UCREL1_1228
Putative gcd10p family protein.
   
  
 0.598
UCREL1_87
Putative wd repeat-containing protein.
   
 
 0.553
UCREL1_8974
Putative ribosomal rna methyltransferase mrm2 protein.
   
 
 0.534
UCREL1_243
Putative et-dependent rrna methyltransferase spb1 protein.
   
 
 0.509
Your Current Organism:
Eutypa lata
NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1
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