STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UCREL1_10785Putative pab-dependent poly-specific ribonuclease subunit pan2 protein. (241 aa)    
Predicted Functional Partners:
UCREL1_671
Putative pab-dependent poly-specific ribonuclease subunit pan3 protein.
  
 
 0.980
UCREL1_3771
Putative pab-dependent poly-specific ribonuclease subunit pan2 protein.
 
     0.929
UCREL1_7601
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
    
 0.884
UCREL1_3257
Putative glucose-repressible alcohol dehydrogenase transcriptional effector protein.
    
 
 0.598
UCREL1_1257
Putative proliferating cell nuclear antigen protein.
  
 0.597
UCREL1_1256
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.597
UCREL1_7443
Citrate synthase; Belongs to the citrate synthase family.
    
 0.563
UCREL1_1856
Putative class e vacuolar protein-sorting machinery protein hse1 protein.
 
      0.558
UCREL1_10769
Putative atp-dependent rna helicase eif4a protein; Belongs to the DEAD box helicase family.
  
 0.515
UCREL1_6191
Putative scf complex subunit skp1 protein; Belongs to the SKP1 family.
 
      0.514
Your Current Organism:
Eutypa lata
NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1
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