UCREL1_7417 protein (Eutypa lata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

UCREL1_7417

Putative phosphoribulokinase uridine kinase family protein. (236 aa)

Predicted Functional Partners:

UCREL1_9341

0.753

UCREL1_8156

0.674

UCREL1_8740

0.514

UCREL1_8778

0.514

UCREL1_5275

0.514

UCREL1_2183

0.514

UCREL1_2201

0.485

UCREL1_6556

0.424

UCREL1_10121

0.400

Your Current Organism:

Eutypa lata

NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
UCREL1_10121	UCREL1_7417	M7SZD4	M7T732	Putative c-1-tetrahydrofolate synthase protein.	Putative phosphoribulokinase uridine kinase family protein.	0.400
UCREL1_2183	UCREL1_2201	M7TVU5	M7T2I6	Putative phosphopantothenoylcysteine decarboxylase protein.	Putative dephospho-kinase protein.	0.571
UCREL1_2183	UCREL1_7417	M7TVU5	M7T732	Putative phosphopantothenoylcysteine decarboxylase protein.	Putative phosphoribulokinase uridine kinase family protein.	0.514
UCREL1_2183	UCREL1_8778	M7TVU5	M7TC69	Putative phosphopantothenoylcysteine decarboxylase protein.	Putative phosphopantothenate-cysteine ligase protein.	0.649
UCREL1_2201	UCREL1_2183	M7T2I6	M7TVU5	Putative dephospho-kinase protein.	Putative phosphopantothenoylcysteine decarboxylase protein.	0.571
UCREL1_2201	UCREL1_5275	M7T2I6	M7TLX5	Putative dephospho-kinase protein.	Uncharacterized protein.	0.571
UCREL1_2201	UCREL1_7417	M7T2I6	M7T732	Putative dephospho-kinase protein.	Putative phosphoribulokinase uridine kinase family protein.	0.485
UCREL1_2201	UCREL1_8740	M7T2I6	M7T3A0	Putative dephospho-kinase protein.	Putative phosphopantothenoylcysteine decarboxylase protein.	0.755
UCREL1_2201	UCREL1_8778	M7T2I6	M7TC69	Putative dephospho-kinase protein.	Putative phosphopantothenate-cysteine ligase protein.	0.754
UCREL1_2201	UCREL1_9341	M7T2I6	M7TAR4	Putative dephospho-kinase protein.	Putative pantoate-beta-alanine ligase protein.	0.684
UCREL1_5275	UCREL1_2201	M7TLX5	M7T2I6	Uncharacterized protein.	Putative dephospho-kinase protein.	0.571
UCREL1_5275	UCREL1_7417	M7TLX5	M7T732	Uncharacterized protein.	Putative phosphoribulokinase uridine kinase family protein.	0.514
UCREL1_5275	UCREL1_8778	M7TLX5	M7TC69	Uncharacterized protein.	Putative phosphopantothenate-cysteine ligase protein.	0.649
UCREL1_6556	UCREL1_7417	M7SQF2	M7T732	Putative 50s ribosomal protein mrp49 protein.	Putative phosphoribulokinase uridine kinase family protein.	0.424
UCREL1_7417	UCREL1_10121	M7T732	M7SZD4	Putative phosphoribulokinase uridine kinase family protein.	Putative c-1-tetrahydrofolate synthase protein.	0.400
UCREL1_7417	UCREL1_2183	M7T732	M7TVU5	Putative phosphoribulokinase uridine kinase family protein.	Putative phosphopantothenoylcysteine decarboxylase protein.	0.514
UCREL1_7417	UCREL1_2201	M7T732	M7T2I6	Putative phosphoribulokinase uridine kinase family protein.	Putative dephospho-kinase protein.	0.485
UCREL1_7417	UCREL1_5275	M7T732	M7TLX5	Putative phosphoribulokinase uridine kinase family protein.	Uncharacterized protein.	0.514
UCREL1_7417	UCREL1_6556	M7T732	M7SQF2	Putative phosphoribulokinase uridine kinase family protein.	Putative 50s ribosomal protein mrp49 protein.	0.424
UCREL1_7417	UCREL1_8156	M7T732	M7SKJ6	Putative phosphoribulokinase uridine kinase family protein.	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	0.674