STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UCREL1_303Putative wd repeat domain-containing protein. (522 aa)    
Predicted Functional Partners:
UCREL1_1851
Putative centromere microtubule-binding protein cbf5 protein.
    
 0.982
UCREL1_6245
Putative h aca ribonucleoprotein complex subunit 2 protein.
    
 0.960
UCREL1_5225
Putative h aca ribonucleoprotein complex subunit 3 protein.
    
 0.936
UCREL1_9421
Putative trna pseudouridine synthase b protein.
    
 0.912
UCREL1_6425
Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.
    
 0.881
UCREL1_8557
Uncharacterized protein.
    
 0.823
UCREL1_5641
Putative gar1-domain-containing protein.
    
 0.823
UCREL1_10663
Uncharacterized protein.
    
 0.823
UCREL1_9698
H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.
    
 0.823
UCREL1_4931
Putative telomere-binding alpha subunit central domain-containing protein.
     
 0.653
Your Current Organism:
Eutypa lata
NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.