STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UCREL1_9842Uncharacterized protein. (414 aa)    
Predicted Functional Partners:
UCREL1_7715
Putative hmg box-containing protein.
    
 0.612
UCREL1_3053
Putative rna polymerase i-specific transcription initiation factor rrn3 protein.
    
 0.517
UCREL1_11678
Putative tata-box-binding protein.
    
 0.509
UCREL1_1459
Putative rna polymerase i and iii transcription factor complex component protein.
    
 0.509
UCREL1_3159
Putative serine threonine-protein kinase protein; Belongs to the protein kinase superfamily.
    
 0.503
UCREL1_11573
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.457
UCREL1_11328
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.448
UCREL1_1799
Putative dna repair helicase rad25 protein.
    
  0.446
UCREL1_9012
Putative dna-dependent rna polymerase i subunit a43 protein.
     
 0.433
UCREL1_4549
Putative a49-like rna polymerase i associated factor protein.
     
 0.433
Your Current Organism:
Eutypa lata
NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1
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