STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UCREL1_6813Putative c-type cyclin protein. (434 aa)    
Predicted Functional Partners:
UCREL1_1270
Putative ctd kinase subunit alpha protein.
    
 0.990
UCREL1_11647
Putative ctd kinase subunit gamma protein.
   
 
 0.970
UCREL1_2346
Putative cmgc cdk protein kinase protein.
    
 0.933
UCREL1_1958
Putative cyclin-k protein.
    
 0.803
UCREL1_223
Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.
    
 0.802
UCREL1_3159
Putative serine threonine-protein kinase protein; Belongs to the protein kinase superfamily.
     
 0.766
UCREL1_3483
Putative rna polymerase ii holoenzyme cyclin-like subunit protein; Belongs to the cyclin family.
     
 0.758
UCREL1_1205
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.730
UCREL1_380
Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.
    
 0.719
UCREL1_4698
Putative cyclin ccl1 protein.
     
 0.711
Your Current Organism:
Eutypa lata
NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1
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